PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676730126
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family ERF
Protein Properties Length: 147aa    MW: 16010.8 Da    PI: 7.5087
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676730126genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-161363155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               s++kG+r++k +g+Wv+eIr+p +   r r +lg+f tae+Aa a++ a  +l++
  676730126 13 SKFKGIRRRK-WGKWVSEIRVPGT---RNRLWLGSFSTAEGAAVAHDVAFYCLHQ 63
               79*****998.**********944...49********************999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.6E-81361IPR001471AP2/ERF domain
CDDcd000185.36E-271375No hitNo description
SuperFamilySSF541715.62E-171374IPR016177DNA-binding domain
SMARTSM003807.0E-311479IPR001471AP2/ERF domain
PROSITE profilePS5103220.9031473IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-241474IPR001471AP2/ERF domain
PRINTSPR003671.8E-81526IPR001471AP2/ERF domain
PRINTSPR003671.8E-83753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MDYRDSNESQ TQSKFKGIRR RKWGKWVSEI RVPGTRNRLW LGSFSTAEGA AVAHDVAFYC  60
LHQPNSLESL NFPHLLPPSI ASKTSPRSIQ QAASNAGMAV DAGIVRSNSS ELVSENSRYG  120
DTTAYCENGG EELEPLNISV VGGPSPL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676730126
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1553401e-101AC155340.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH020D15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006416153.16e-80ethylene-responsive transcription factor ERF019
SwissprotO805427e-75ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLV4MRX11e-78V4MRX1_EUTSA; Uncharacterized protein
STRINGXP_006416153.12e-79(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38652860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.13e-77ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]