PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676715014
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 550aa    MW: 63482.7 Da    PI: 6.3279
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676715014genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.6e-1192135447
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                +k  rr+++NReAAr+sR+RKka++++Lee   +L++  ++L k
  676715014  92 DKTKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEK 135
                7999**************************98888888776654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-584147IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.33591135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-892136No hitNo description
PfamPF001708.1E-892135IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-693135No hitNo description
PROSITE patternPS00036096111IPR004827Basic-leucine zipper domain
PfamPF141443.3E-28180254IPR025422Transcription factor TGA like domain
PROSITE profilePS5007615.397354427IPR001623DnaJ domain
SMARTSM002719.6E-10355419IPR001623DnaJ domain
PRINTSPR006252.6E-12358376IPR001623DnaJ domain
CDDcd062573.69E-11362416IPR001623DnaJ domain
PfamPF002261.6E-16362424IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1101.1E-17363426IPR001623DnaJ domain
SuperFamilySSF465651.44E-17363425IPR001623DnaJ domain
PRINTSPR006252.6E-12376391IPR001623DnaJ domain
PRINTSPR006252.6E-12399419IPR001623DnaJ domain
PROSITE patternPS006360404423IPR018253DnaJ domain, conserved site
PRINTSPR006252.6E-12445464IPR001623DnaJ domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MMSSSPTQLA SLRDMGIYEP FQQIVSWGNV FKSDINDHSP NTASSSVIQV DARIDDHNSL  60
IKSNYASSSH NQMEAEPSSN DHQDDDDGRI PDKTKRRLAQ NREAARKSRL RKKAYVQQLE  120
ESRLKLSQLE QELEKAKQQG LCVRNSSDSS YLGPSGSMNT RIAAFEMEYS HWLEEQSRRV  180
SEIRRALQAH ISDIELRMLV ESSLNHYANL FRMKADAAKA DVFFLISGMW RTSTERFFQW  240
IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLVENIVVD  300
AVIESTDYPP HMAAALENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQAA RGLVLFWFLS  360
TELERDAEEE QIKVAYRRLA KYYHPDVYDG KGTLEEGETA EGRFIKIQAA YELLMDTEKR  420
RQYDMDNRVN PMKASQAWME WLIKKRKAFD QRGDMAIAAW AEQQQLEINL RARRLSRSKV  480
DPEEERKILE KEKKASRELV NSTLKRHTLV LKKRDLMRKK AEEDKKKLIT QLLAAEGLEL  540
DTEEEEEAPK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676715014
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3533840.0AK353384.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-35-N08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010471992.10.0PREDICTED: transcription factor TGA7
SwissprotQ93ZE20.0TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A3P6BCZ90.0A0A3P6BCZ9_BRACM; Uncharacterized protein
STRINGBo6g081910.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.10.0bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]