PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011100220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 306aa    MW: 33403.8 Da    PI: 6.8554
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011100220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.81.3e-36241393100
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssas....nsssg.. 88 
                     g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l++++ s+a+++    + s s+ ++    ++s++  
  XP_011100220.1  24 GRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKTAIDKLNQLPPSQANHSnhlAPTSGSNDHQlpldQQSETpp 118
                     89*************************************************************55554444333222222222222212222245 PP

             TCP  89 .........kaaksaakskks 100
                              +++   ++++++
  XP_011100220.1 119 gyqllannpNSSFMGPPGEPD 139
                     555555554333333344444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.8E-3224104IPR005333Transcription factor, TCP
PROSITE profilePS5136933.0642583IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MKSTIREGGE ITQVQGGQIL RSIGRKDRHS KVYTSKGPRD RRVRLSAHTA IQFYDVQDRL  60
GYDRPSKAVD WLINKAKTAI DKLNQLPPSQ ANHSNHLAPT SGSNDHQLPL DQQSETPPGY  120
QLLANNPNSS FMGPPGEPDA HLENTMKSFF PTSSLGSFPG FSSDSVSRAP FQAQDLGLSL  180
HTLHSDNHDH GNAGNPVLPL HETFQRIGGW NSGGDMDGRV GFLMNSQEIS QQALFPQGLP  240
FSHRELLLSN IAAHQAWNQR PFLGSSDEQN PDPSGPPQSS DFGSPSGLGF RVPARIYGEE  300
EPGTRG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100220.10.0PREDICTED: transcription factor TCP10-like
SwissprotO822771e-50TCP10_ARATH; Transcription factor TCP10
TrEMBLA0A067K9Y17e-77A0A067K9Y1_JATCU; Uncharacterized protein
STRINGPOPTR_0013s12370.11e-65(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.16e-52TCP domain protein 10