PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011097893.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 380aa    MW: 43045.7 Da    PI: 5.532
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011097893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-1086116535
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekv 35 
                     k +rr+++NReAAr+sR+RKka++++Le+  
  XP_011097893.1  86 KIQRRLAQNREAARKSRLRKKAYVQQLETSR 116
                     779************************9854 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-779131No hitNo description
SMARTSM003382.0E-582146IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.05984128IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-686131No hitNo description
PfamPF001703.4E-786119IPR004827Basic-leucine zipper domain
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
PfamPF141441.2E-27172246IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MYSDFQVPDM TSPTTQFAPP SRIGIYEPLR QIGMWEDTFD DNISAGTGVC IIMETEAKLD  60
DKTEYASDKS LEHAEDSQAS KSISEKIQRR LAQNREAARK SRLRKKAYVQ QLETSRMKLA  120
QLELELERAR QQQGLLIASA TANVGICGTI NPGIAAFEME YRHWIDEQER KISELRNLLQ  180
SPIGDAELRM VVENVLNHYC NLFRMKRDAA RADAFYLESG MWRTSVERFF LWIGGFRPSE  240
LINVVMPQLE PLTEEQIASV NNLRHSCVQA EDALSQGMEK LQQTLAQSLT FLAAGAGNYS  300
SQTAAALEKL ESLESFINQA DHLREQTLHQ MSRILTTRQA AKGLLAFGEY FQRLRALSSL  360
WSARSIENLA NLQNDANSIR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011097893.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097893.10.0transcription factor TGA4 isoform X1
SwissprotQ392371e-148TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A2G9GQM50.0A0A2G9GQM5_9LAMI; Uncharacterized protein
STRINGMigut.C00214.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-131bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]