PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095221.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GRAS
Protein Properties Length: 570aa    MW: 65180.9 Da    PI: 4.5916
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS128.57.8e-402055681373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+ Aea++++++ela+ +  ++ + ++p g +++R+  y+ + L+++                 ++++s++   a+ +f++++P+ kf+h
  XP_011095221.1 205 LIHLLLAYAEAMDNQETELAEVISRHIIQKVNPVGGTTERVLYYMFQHLNKQPDY-------------LEQESSKNFYPAFMAFYQMFPYGKFAH 286
                     689******************************************9988776554.............333447888999999************ PP

            GRAS  96 ltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakr 185
                     l+a  aIlea+  + e +H iDfdi++G+QW+++++a+  +     ++R+T v+ +e++    s+   eet++rL + A++ g+++e + +  ++
  XP_011095221.1 287 LVAILAILEAMPWDaEIIHLIDFDIGEGVQWAPFMEAIKYQ---HKEIRLTSVKLNEEDetnpSRWGFEETKRRLCDHADSYGLKMEVQEVGLQD 378
                     ***********9886888********************986...556*******9988889999999***********************96666 PP

            GRAS 186 ledl..eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk.sls..Pkvvvvveqeadhnse...sFlerflealeyysalfdsle 272
                     le++  +++e +  ++   a n+++ l ++   +   ++   e+L++ + sl     +++  + +a hn +   s+ + + + + +y al++s+e
  XP_011095221.1 379 LESMmkNMKEGEYGRKSWYAFNCHVGLPHMA--RIRNRNDVLEFLSVANnSLHhvKGIITYGDGDAWHNISsscSYTTFLDNNFTHYQALLESME 471
                     666622333334444889************8..33444445566665541232113589******99975544589999999************* PP

            GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWk 363
                     +++p++  e+ri +E  ++++ ++     ++ e      ++++  e    +G+k  ++se  + +ak +++  +  g r+    e+++++v+ W+
  XP_011095221.1 472 SNFPAHLgEARIALESLFVAPLVRWGTWDRKWE------EKKQCGEFEVGVGLKGWKFSEASVVEAKEMVKSEY--GVRIGfggEKKNEMVMEWN 558
                     ****99978899999996666554444443333......344444555679*******************9999..666666679999******* PP

            GRAS 364 drpLvsvSaW 373
                     + p+v v++W
  XP_011095221.1 559 GIPMVRVCCW 568
                     ********** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098519.467179548IPR005202Transcription factor GRAS
PfamPF035142.7E-37205568IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MPQFGLAANA VCPFEVLIYR ARRIFMSSLG FKLKSFQKMS LCEIYQPSMI LFNNVNPFSN  60
DAAAEETLSP LFSFTENSPE ISSSMKYLET IFYDECMEFP VHGDELHASS AIHDISAADD  120
SFMDVDEFDY IFNAADVNSI PQPVNETAES GVSYCSQQFP SDDGFCSWNH DRSMEVCETF  180
MDKTNMHPPP VLPSEGMEAG NQLCLIHLLL AYAEAMDNQE TELAEVISRH IIQKVNPVGG  240
TTERVLYYMF QHLNKQPDYL EQESSKNFYP AFMAFYQMFP YGKFAHLVAI LAILEAMPWD  300
AEIIHLIDFD IGEGVQWAPF MEAIKYQHKE IRLTSVKLNE EDETNPSRWG FEETKRRLCD  360
HADSYGLKME VQEVGLQDLE SMMKNMKEGE YGRKSWYAFN CHVGLPHMAR IRNRNDVLEF  420
LSVANNSLHH VKGIITYGDG DAWHNISSSC SYTTFLDNNF THYQALLESM ESNFPAHLGE  480
ARIALESLFV APLVRWGTWD RKWEEKKQCG EFEVGVGLKG WKFSEASVVE AKEMVKSEYG  540
VRIGFGGEKK NEMVMEWNGI PMVRVCCWIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095221.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095221.10.0nodulation-signaling pathway 2 protein-like
TrEMBLA0A2G9H7730.0A0A2G9H773_9LAMI; Uncharacterized protein
STRINGMigut.J00120.1.p1e-165(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-18GRAS family protein