PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094643.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB_related
Protein Properties Length: 597aa    MW: 66747.9 Da    PI: 7.2588
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.9e-09472519448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E ++l+d+v+++G g+W++I + +     +Rt  ++k++w+++l
   XP_011094643.1 472 WTIAEVKKLIDGVAEYGVGRWSRIKKLFFsasAHRTSVDLKDKWRNLL 519
                      9*********************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-13463522IPR009057Homeodomain-like
PROSITE profilePS5129415.793464523IPR017930Myb domain
SuperFamilySSF466893.45E-16466521IPR009057Homeodomain-like
SMARTSM007171.3E-9468521IPR001005SANT/Myb domain
CDDcd116607.40E-20472520No hitNo description
PfamPF002492.3E-7472519IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    Send to blast
MENGPPTIGF EDGTIDVERL LVEPQDGHVS VDSVMCFNDI AENAMEMEEV SRHFGVPNTA  60
VSQECGEDIL NGDVLDSMRE VEVGYFRMQN DFCSMGEEYL LGVEFAESIT NLDYGSSEGL  120
QTSVSDSPVL ASAAVTDTPW KADLFRAMEV PECQNHQLNA DSSRFGEISD PCHKSETFVE  180
EEEPSKSPTS CALQDMGKFH DISSCSFQDI LDENDTSLSP SVDMLHSPKN EKSSEFGGLT  240
GQTGEIKRFL GRDALVTTSA PASHTNTFPT PKRSRKPTQR YIDELADPLS RHSKKRREVS  300
SSKSLGVKDH KKCRLGPRAI RLPAEESSVK AIQVPFGSLV QNECPESCAY DMVRSSDRGN  360
LMTKSKDSRI SSENQKKKDV FAGAIHLKKR DDSVSAATQK KRDDNVAAVH LKKREDNVTA  420
VHIKKRDDNI TAVSPKKPDD CDATVRQKKR DDYLTAESSE EVNGRRKHHR LWTIAEVKKL  480
IDGVAEYGVG RWSRIKKLFF SASAHRTSVD LKDKWRNLLK ASGIQSQGSR QGEKKRNMAW  540
RPLPKSILRR VCELATIYPY PKGRKTKIAH IHHDSPDRST DITLGDYRRI LRSINGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1463470GRRKHHRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094643.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094643.10.0uncharacterized protein LOC105174291 isoform X1
TrEMBLA0A0K1SB990.0A0A0K1SB99_REHGL; Telomere repeat-binding factor like-protein
STRINGMigut.L01689.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.14e-26TRF-like 6