PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094418.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 187aa    MW: 20969.7 Da    PI: 6.8416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-1983134256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdp++ g   r +lg++ t+eeAa a+++a+ kl+g+
  XP_011094418.1  83 RYRGVRRRP-WGKFAAEIRDPVKKG--SRMWLGTYETPEEAALAYDRAAFKLRGA 134
                     8********.**********76643..**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.62E-3282143No hitNo description
SMARTSM003807.6E-3783147IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2383142IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.6E-3283142IPR001471AP2/ERF domain
PfamPF008478.9E-1483133IPR001471AP2/ERF domain
PROSITE profilePS5103224.55383141IPR001471AP2/ERF domain
PRINTSPR003672.7E-108495IPR001471AP2/ERF domain
PRINTSPR003672.7E-10107123IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MELAERMSEF DVGLLQSIQN FLLSDSEFSL DFLWDNATPV LDDSESSTSQ MVDELLSNNS  60
DGGEVVETPP PRSVKAPPAE WKRYRGVRRR PWGKFAAEIR DPVKKGSRMW LGTYETPEEA  120
ALAYDRAAFK LRGARARVNF PNLIGSGAPE PIRVTKRCRS PQDPVIFDSA SFTEMNAGRK  180
KMKVAVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2979147169ATERF1
3gcc_A2e-2979147169ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094418.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094418.11e-135ethylene-responsive transcription factor 13-like
TrEMBLA0A2G9HT341e-63A0A2G9HT34_9LAMI; Uncharacterized protein
STRINGSolyc01g090310.2.11e-48(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-40ethylene-responsive element binding factor 13