PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094406.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 211aa    MW: 23688.5 Da    PI: 7.2155
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-17107157255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g ++Ae rdp +  k  r++lg++ t+eeAa a+++a+ kl+g
  XP_011094406.1 107 RYRGVRRRP-WGTFAAEMRDPAK--KGSRIWLGTYETPEEAAVAYDRAAFKLRG 157
                     7********.**********954..34*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.8E-12107157IPR001471AP2/ERF domain
SMARTSM003801.5E-35107171IPR001471AP2/ERF domain
PROSITE profilePS5103223.841107165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-30107166IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-22107166IPR016177DNA-binding domain
PRINTSPR003671.3E-9108119IPR001471AP2/ERF domain
CDDcd000188.23E-25115167No hitNo description
PRINTSPR003671.3E-9131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MESQNTSEFD HVSLLQSLQT YLLSDCDDFP LDLLWDNATP AVIHDEDYLS QMVEDLLSDN  60
SSHGGEVIMF GTPSTTQSVS NNSSDEGEVV ETPPRQSVKA PPVEWRRYRG VRRRPWGTFA  120
AEMRDPAKKG SRIWLGTYET PEEAAVAYDR AAFKLRGSRA RVNFPHLIGS GAPEPTRVTK  180
RRHHHAPAAL VSPSWAQTNV VRKRMKICSP K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-28108171669ATERF1
3gcc_A2e-28108171669ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094406.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094406.11e-157ethylene-responsive transcription factor 1-like
TrEMBLA0A2G9HT312e-60A0A2G9HT31_9LAMI; Uncharacterized protein
STRINGSolyc01g090310.2.13e-51(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-33ethylene-responsive element binding factor 13