PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 130aa    MW: 14557.1 Da    PI: 6.811
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-191667256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd       + +r++lg+f taeeAa+a+++a+ +++g+
  XP_011091224.1 16 KYRGVRKRP-WGKYAAEIRD----SarQGARVWLGTFNTAEEAARAYDKAAYAMRGH 67
                    8********.**********....33334**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.64E-271675No hitNo description
Gene3DG3DSA:3.30.730.108.4E-321676IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-231675IPR016177DNA-binding domain
PROSITE profilePS5103223.5381674IPR001471AP2/ERF domain
SMARTSM003806.5E-341680IPR001471AP2/ERF domain
PfamPF008471.2E-141667IPR001471AP2/ERF domain
PRINTSPR003677.5E-121728IPR001471AP2/ERF domain
PRINTSPR003677.5E-124056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MDNRGKNADK DAGEIKYRGV RKRPWGKYAA EIRDSARQGA RVWLGTFNTA EEAARAYDKA  60
AYAMRGHLAI LNFPEEYNLP SSSSHFASPS GSGSSSGSMQ PREVIEFEYL DDKLLEELLD  120
DNDHKGKKKD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-3811291131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091224.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091224.14e-92ethylene-responsive transcription factor ERF096
SwissprotQ9LTC52e-40ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G9I9T01e-68A0A2G9I9T0_9LAMI; Uncharacterized protein
STRINGMigut.N00263.1.p3e-52(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.18e-27ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]