PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089574.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family MYB_related
Protein Properties Length: 255aa    MW: 27396.6 Da    PI: 9.1288
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.7e-0762106344
                      SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44 
                       WT+eE+ +l d+  ++G++    + ++Ia+ +   +t  ++ +r 
   XP_011089574.1  62 DWTPEEQSILEDLLVKYGSEsvivRYAKIAQALR-DKTVRDVALRC 106
                      6*********************************.99999998885 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.58E-756116IPR009057Homeodomain-like
SMARTSM007170.001959112IPR001005SANT/Myb domain
PfamPF002495.5E-662106IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-463114IPR009057Homeodomain-like
CDDcd001671.78E-663107No hitNo description
PfamPF125796.2E-17196229IPR022228Protein of unknown function DUF3755
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MAASANPSSG AHSNASNGNN NSGNSKGGGQ ENANGGGLSA TENSVVGPTQ AALRHNPGLS  60
VDWTPEEQSI LEDLLVKYGS ESVIVRYAKI AQALRDKTVR DVALRCRWMS KKENGKRRKD  120
DSSSSRKSKD KKEKVTDSLP KSSQVANRSN GPAYVQSMMS MESDDGISYK DIGGAAGQLL  180
EQSAHALDQI SANFSACKIH DNINLFCQAR TNILSILNDL NDTPEIMKQM PPLPVKLNEE  240
LANSILPRTS LPKKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125132RKSKDKKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089574.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089574.10.0uncharacterized protein LOC105170494 isoform X2
TrEMBLA0A2G9HQI71e-140A0A2G9HQI7_9LAMI; Uncharacterized protein
STRINGMigut.N00689.1.p1e-138(Erythranthe guttata)