PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011088884.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 487aa    MW: 54165.8 Da    PI: 7.5674
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011088884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10182218440
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                      k  rr+++NReAAr+sR+RKka++++Le     L++
  XP_011088884.1 182 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 218
                     6889*************************86655555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-6177244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163181225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.8E-8181225No hitNo description
PfamPF001701.5E-7182223IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-7183226No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141449.0E-33264339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MASQRLGEAA LSESGPSHHH HHIPYSLPHM LHHPNTSFIN QEGSAFDFGE LEEAIVLQGV  60
KINNDETKQP LYTTVRPAAT LEMFPSWPMR FQQHTPRGSS KSGEESTDSG SAVNTLSTTR  120
LEPDSPISRK TSSDHRLPPP QMDTGSGVDS PRTGGSQTQP AAKQAPEKRR GPGSNSEKVL  180
DAKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIRLTQLE QDLQRARSQG LFLGGGGVAG  240
GNISSGGAIF DMEYARWLED DHRHMSELRT ALQAHLSDGD LRVIVDGYIA HYDEIFRLKG  300
VAAKSDVFHL ITGMWTTPAE RCFLWMGGFR PSDLIKMLIT QLDPLTEQQV MGIYGLQQSS  360
QQAEEALSQG LEQLQQSLID TIANGSINDS MHHMAVALGK LSNLEGFVRQ ADNLRQQTLH  420
QLRRILTVRQ AARCFLVIGE YYGRLRALSS LWASRPRETL IVDDSSCQTT TTDLQMVQSS  480
QNQFSNF
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011088884.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088884.10.0transcription factor TGA9 isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A2G9I6Q30.0A0A2G9I6Q3_9LAMI; Transcriptional activator of the JUN family
STRINGEOY334490.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]