PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 296aa    MW: 32266 Da    PI: 7.5592
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof111.63.5e-3546103259
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                     +++ l+cprC stntkfCyynny+ sqPr+fCk+C+r+WtkGG+lrnvPvGggr++++
  XP_011087020.1  46 QSEPLNCPRCGSTNTKFCYYNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKR 103
                     56889***********************************************977665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-2443103IPR003851Zinc finger, Dof-type
PfamPF027018.6E-3149102IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.39150104IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105288IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGLGTELQVS GDHQQGLDWG QPLLQSGKAE LAKPPSGRRQ QPLKQQSEPL NCPRCGSTNT  60
KFCYYNNYNK SQPRHFCKSC KRHWTKGGTL RNVPVGGGRK NKRPKISHPT TTTSTTTVTA  120
TAASPATATR LHDRASFPYT NISTDQRSMS NILYKALICS SSPSLLHNAT DGINISIPGK  180
PLVGSNGISN KTGFTEVPFS SLSTTFEVMN SSLMNPTPHQ LLDDHIDHYA GNIDSTEESI  240
ITTLDIPSTA SAAWPVADTS SVMDLPNYWN WNEIDAFTSS ADLNIAWDDI DAEIKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087020.10.0PREDICTED: dof zinc finger protein DOF5.8-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61712033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.16e-29DOF zinc finger protein 1