PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011086646.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 418aa    MW: 45545.4 Da    PI: 6.4054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011086646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-174998255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_011086646.1 49 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 98
                    59*******.**********93....35999**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.64E-2149106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-2949105IPR001471AP2/ERF domain
CDDcd000186.64E-3049105No hitNo description
PROSITE profilePS5103222.08949106IPR001471AP2/ERF domain
PfamPF008471.1E-104998IPR001471AP2/ERF domain
SMARTSM003801.7E-3349112IPR001471AP2/ERF domain
PRINTSPR003672.5E-95061IPR001471AP2/ERF domain
PRINTSPR003672.5E-97288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MEEALRRLNG ALTTDSDTLL QPVAVPKRCT TNKRSLKDAA ASSGGGTMRY RGVRRRPWGR  60
YAAEIRDPQS KERRWLGTFD TAEEAACAYD CAARAMRGVK ARTNFVYPTS PTHPAVENLI  120
PSFNYAKSSQ PSILGSRQFV SSSSFGNPNL DFNGSSFRGS NSLNMLRLRD YFNPPNSKYS  180
ETSSFNLPLH EQNPLNFLNS SSSPPPPNEF MASSSLLNLS CNTTSQATSV NATVVSDTSF  240
KGSCLSTDKF DGFENTTNSG VLTNHVVSTD QADSMDFFPT ERSGSGLLQE VLHGFFPKPK  300
AAEAEAEKSP QGTVESFSPL SAAEVSARQE NHEAKNHKAF ENELLGFSLD YQRVSPLYES  360
VNSTVNFSGM ETISTTPYCS DFPAMAVNIP ANASNGILGD IFHYQEALTL FAAKVQNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-19491051471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011086646.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086646.10.0ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2G9GV380.0A0A2G9GV38_9LAMI; Uncharacterized protein
STRINGMigut.K00605.1.p1e-136(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.15e-14ERF family protein