PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085907.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 291aa    MW: 33475.7 Da    PI: 7.3796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-193282255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +g+++AeIrd + ng  kr++lg+f+t+eeAa a+++a+ + +g
  XP_011085907.1 32 RYIGVRRRP-WGKYAAEIRDSTRNG--KRVWLGTFDTEEEAALAYDQAAFATRG 82
                    799******.**********44465..**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.68E-283190No hitNo description
SMARTSM003802.6E-333296IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-283291IPR001471AP2/ERF domain
PROSITE profilePS5103222.0763290IPR001471AP2/ERF domain
PfamPF008473.5E-143282IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-223291IPR016177DNA-binding domain
PRINTSPR003672.4E-93344IPR001471AP2/ERF domain
PRINTSPR003672.4E-95672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MDHSFSSFQT SAVEVAESSN LRNGQDPRRE KRYIGVRRRP WGKYAAEIRD STRNGKRVWL  60
GTFDTEEEAA LAYDQAAFAT RGPLVSLNFP LEKVAESLQK MKYSCKEGSS PAKAIKESHK  120
MLKSSKMKQV TEDGIVVFED LGSDLLDELL SESSYNFENQ RYILDKPLPT ALLEGSSPKE  180
RVTFEKLLED NRKVYCIKFA LMSDDIRKHY DKLDDVSSIM FRIKEIYAGT RILDILPQKY  240
SSGPRWLNDR NDLQVYTSGN DRRGFNLQSE RQEGWKLEEE EGQGKSCRSY C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2432921474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085907.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551366.11e-110ethylene-responsive transcription factor 1B-like isoform X1
TrEMBLA0A022S0A83e-72A0A022S0A8_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.K00942.1.p7e-73(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-38ethylene response factor 1