PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084333.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HD-ZIP
Protein Properties Length: 803aa    MW: 88563.9 Da    PI: 6.4689
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.82.4e-152985557
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     ++t+eq+e+Le++++++++p++ +r+++ ++     g++ +q kvWFqNrR +ek+
  XP_011084333.1 29 ARYTEEQIEVLEKVYAECSNPNHYRRAQIMREQpilrGINNKQLKVWFQNRRCREKQ 85
                    579*****************************999********************97 PP

2START22.91.8e-08167264297
                     HHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEE..ECTTEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlev..issggalql 93 
                     laee+ +e+++ka  ++ +W  ++  ++ ++e++ ++  s ++ g a+ra++  ++++ +  e+l ++   W++ ++ ++++++  +++gg+++l
  XP_011084333.1 167 LAEETKKEFLSKAIGTAVNWIPVPgLKLRNPESTGTIYVSATCIGVAARACVTIPGEPIKIIEILKNRL-SWSRSCRNMDVVAKypVENGGTIEL 260
                     78999*******************967777777777766666*****************8888888888.*************955678899999 PP

                     EEEX CS
           START  94 mvae 97 
                     ++++
  XP_011084333.1 261 IYTQ 264
                     9876 PP

3START42.22.1e-14267343127201
                     EEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTX CS
           START 127 dvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlq 201
                     ++S++  +  p+     ++vR+++l+Sg+li+p+++g s++  ++h dl+++++++++r+l++s+  ++ ++ v++l+
  XP_011084333.1 267 EQSISGSDGAPSspvALEFVRGRMLVSGYLIRPCEGG-STIDLLDHLDLEASSVPEVVRPLYESSELMAKQMIVSALH 343
                     555555554444445899******************9.*****************************99999998886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-141888IPR009057Homeodomain-like
SuperFamilySSF466893.68E-132087IPR009057Homeodomain-like
PROSITE profilePS5007114.1712286IPR001356Homeobox domain
SMARTSM003891.6E-102390IPR001356Homeobox domain
PfamPF000465.0E-132985IPR001356Homeobox domain
CDDcd000862.88E-123087No hitNo description
CDDcd146864.81E-579118No hitNo description
SuperFamilySSF559619.75E-12167329No hitNo description
PfamPF018524.8E-5167264IPR002913START domain
PfamPF018521.5E-11266343IPR002913START domain
PfamPF086708.0E-31660802IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    Send to blast
MARTELAIGE GSQGGRGGRR GRPEGGRYAR YTEEQIEVLE KVYAECSNPN HYRRAQIMRE  60
QPILRGINNK QLKVWFQNRR CREKQKKENG NLALENRRLA TANKMLRQEN DGLQKKLAQV  120
LCENDHLRNQ VITLTSTITT YNLGRQPEAN DPQLPIRIGD NNSLLSLAEE TKKEFLSKAI  180
GTAVNWIPVP GLKLRNPEST GTIYVSATCI GVAARACVTI PGEPIKIIEI LKNRLSWSRS  240
CRNMDVVAKY PVENGGTIEL IYTQVCEQSI SGSDGAPSSP VALEFVRGRM LVSGYLIRPC  300
EGGSTIDLLD HLDLEASSVP EVVRPLYESS ELMAKQMIVS ALHFIEHVGN ETNGKQIHSC  360
HEDPAFLRSV SRRLCRGFND AVNCFSEDGW TLMNVNASDD IIMSIKRTAS FGVGANYDSI  420
ICVKASLLLQ NVIPASLVRL LKEHRSAWMD FNFADHSVAF SKAACYAYPG PTIHNLSGTP  480
VMLGHTNHDD EELEVIRFER SANQQHVSSG DLYHLQVITG MDDTGFGACS ELIFAPIDRT  540
IPNDAALLCS GFRIFLLGSN TGEDTGSSNI APNEALNARN AQAAISHPLS MLIVAFQFPS  600
EADLQEDVAS MARQYVKSVI SSVKNISLRT MSSGSNPVMH SHEANPAMGL KIPESTYFVN  660
LADLICQSYR SSLGVDMVGF NCESTDSMLE QIHHHHYAIL CFSFMSLQAC LYANQAALNM  720
LETTLDNLHM LTVERILDGS NNLSLFSVFP TIMQQGYAIL PPGNCLSVTN RCVSYAQAVV  780
WKVLAPDGSV HCLALALIDW SFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084333.10.0PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform X3
TrEMBLB9SVC70.0B9SVC7_RICCO; DNA binding protein, putative
STRINGGLYMA11G20520.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein