PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084331.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HD-ZIP
Protein Properties Length: 805aa    MW: 88635.1 Da    PI: 6.5029
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.73.5e-0735593757
                    C....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox 37 l....gLterqVkvWFqNrRakekk 57
                         g++ +q kvWFqNrR +ek+
  XP_011084331.1 35 QpilrGINNKQLKVWFQNRRCREKQ 59
                    45556899***************97 PP

2START115.86e-371413452201
                     HHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEE..ECTTEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlev..issggalql 93 
                     laee+ +e+++ka  ++ +W  ++  ++ ++e++ ++  s ++ g a+ra++  ++++ +  e+l ++   W++ ++ ++++++  +++gg+++l
  XP_011084331.1 141 LAEETKKEFLSKAIGTAVNWIPVPgLKLRNPESTGTIYVSATCIGVAARACVTIPGEPIKIIEILKNRL-SWSRSCRNMDVVAKypVENGGTIEL 234
                     78999*******************967777777777766666*****************8888888888.*************9556788***** PP

                     EEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHH CS
           START  94 mvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrsl 184
                     ++++++a++ +++ Rdf+++Ry+  l +g++v++++S++  +  p+     ++vR+++l+Sg+li+p+++g s++  ++h dl+++++++++r+l
  XP_011084331.1 235 IYTQYYAPTIMACaRDFWTLRYTSILDDGSFVVCEQSISGSDGAPSspvALEFVRGRMLVSGYLIRPCEGG-STIDLLDHLDLEASSVPEVVRPL 328
                     ***************************************9998887778899******************9.*********************** PP

                     HHHHHHHHHHHHHHHTX CS
           START 185 vksglaegaktwvatlq 201
                     ++s+  ++ ++ v++l+
  XP_011084331.1 329 YESSELMAKQMIVSALH 345
                     ******99999998886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.4462360IPR001356Homeobox domain
PfamPF000461.3E-42859IPR001356Homeobox domain
SuperFamilySSF466897.27E-53962IPR009057Homeodomain-like
CDDcd000860.001224061No hitNo description
Gene3DG3DSA:1.10.10.601.1E-54063IPR009057Homeodomain-like
CDDcd146864.82E-55392No hitNo description
PROSITE profilePS5084820.266131332IPR002913START domain
SMARTSM002344.3E-24140350IPR002913START domain
SuperFamilySSF559611.07E-24141331No hitNo description
PfamPF018524.3E-34141345IPR002913START domain
Gene3DG3DSA:3.30.530.201.4E-18177325IPR023393START-like domain
PfamPF086708.1E-31662804IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    Send to blast
MARTELAIGE GSQGGRGGRR GRPEGGRRAQ IMREQPILRG INNKQLKVWF QNRRCREKQK  60
KENGNLALEN RRLATANKML RQENDGLQKK LAQVLCENDH LRNQVITLTS TITTYNLGRQ  120
PEANDPQLPI RIGDNNSLLS LAEETKKEFL SKAIGTAVNW IPVPGLKLRN PESTGTIYVS  180
ATCIGVAARA CVTIPGEPIK IIEILKNRLS WSRSCRNMDV VAKYPVENGG TIELIYTQYY  240
APTIMACARD FWTLRYTSIL DDGSFVVCEQ SISGSDGAPS SPVALEFVRG RMLVSGYLIR  300
PCEGGSTIDL LDHLDLEASS VPEVVRPLYE SSELMAKQMI VSALHFIEHV GNETNGKQIH  360
SCHEDPAFLR SVSRRLCRGF NDAVNCFSED GWTLMNVNAS DDIIMSIKRT ASFGVGANYD  420
SIICVKASLL LQNVIPASLV RLLKEHRSAW MDFNFADHSV AFSKAACYAY PGPTIHNLSG  480
TPVMLGHTNH DDEELEVIRF ERSANQQHVS SGDLYHLQVI TGMDDTGFGA CSELIFAPID  540
RTIPNDAALL CSGFRIFLLG SNTGEDTGSS NIAPNEALNA RNAQAAISHP LSMLIVAFQF  600
PSEADLQEDV ASMARQYVKS VISSVKNISL RTMSSGSNPV MHSHEANPAM GLKIPESTYF  660
VNLADLICQS YRSSLGVDMV GFNCESTDSM LEQIHHHHYA ILCFSFMSLQ ACLYANQAAL  720
NMLETTLDNL HMLTVERILD GSNNLSLFSV FPTIMQQGYA ILPPGNCLSV TNRCVSYAQA  780
VVWKVLAPDG SVHCLALALI DWSFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084331.10.0PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform X2
TrEMBLB9SVC70.0B9SVC7_RICCO; DNA binding protein, putative
STRINGGLYMA11G20520.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein