PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011081776.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HD-ZIP
Protein Properties Length: 841aa    MW: 92750.2 Da    PI: 6.3692
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011081776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.5e-192078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_011081776.1 20 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP

2START184.36.6e-581643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+s+g  g+++l 
  XP_011081776.1 164 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVASRACGLVGLEPT-RVAEILKDRPSWYRDCRAVDVLNVLSTGsgGTVELL 257
                     789*******************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  +++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_011081776.1 258 YMQLYAPTTLAPaRDFWLLRYTSVMEDGSLVVCERSLNNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 352
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s++  +++t++a+l+++++
  XP_011081776.1 353 ESSTLLAQRTTLAALRQLRQ 372
                     ****************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.6611579IPR001356Homeobox domain
SMARTSM003891.3E-151783IPR001356Homeobox domain
SuperFamilySSF466893.64E-171983IPR009057Homeodomain-like
CDDcd000861.26E-162080No hitNo description
PfamPF000461.6E-162178IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.0E-182278IPR009057Homeodomain-like
CDDcd146861.15E-672111No hitNo description
PROSITE profilePS5084826.392154369IPR002913START domain
CDDcd088754.87E-81158373No hitNo description
SuperFamilySSF559611.92E-37163373No hitNo description
Gene3DG3DSA:3.30.530.201.5E-23163369IPR023393START-like domain
SMARTSM002347.1E-42163373IPR002913START domain
PfamPF018522.1E-55164372IPR002913START domain
PfamPF086707.0E-52698840IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    Send to blast
MMAVTSACKD SSKMGVDNGK YVRYTPEQVE ALERLYHECP KPSSLRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLTAMNKLLM EENDRLQKQV SQLVYENSYF  120
RQQTQNTTLA TTDNSCESVV TSGQHHLTPQ HPPRDASPAG LLSIAEETLT EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIIA ISHGCTGVAS RACGLVGLEP TRVAEILKDR PSWYRDCRAV  240
DVLNVLSTGS GGTVELLYMQ LYAPTTLAPA RDFWLLRYTS VMEDGSLVVC ERSLNNTQNG  300
PSMPPVQHFV RAEMLPSGYL IRPCEGGGSI IHIVDHMDLE PWSVPEVLRP LYESSTLLAQ  360
RTTLAALRQL RQISQEVSQP SVTGWGRRPA ALRALSQRLS RGFNEAVNGF TDEGWSMIES  420
DGIDDVTVHV NSSPGKLMGT ILTYANGFPS MSNAVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADSGIDA YSAAAVKAGP CSLPVSRVGC FGGQVILPLA HTIENEEFME VIRLENMAQY  540
RDDMIMPSDI FLLQVCNGVD ESAVGTCAEL IFAPIDASFS DDAPLLPSGF RIIPLDSKTD  600
ASTPNRTLDL ASTLEVGPTG NRSPGDHSRN AGTAKSVMTI AFQFAFEIHL QESVTAMARQ  660
YIRSIISSVQ RVALALSPSR LGPHASLRPP PGTPEAQTLA RWICQSYRFF LGVELLKTPT  720
EGSDSVLKTL WHHSDAVMCC SLKALPVFTF ANQAGLDMLE TTLVALQDIT LEKIFNDNGK  780
KTLFAELPQI MQQGFACLQG GICLSSMGRP ISYERAVAWK VLNEEEDAHC LCFMFINWSF  840
V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081776.10.0PREDICTED: homeobox-leucine zipper protein ATHB-15-like
SwissprotQ9ZU110.0ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLA0A068UKR50.0A0A068UKR5_COFCA; Uncharacterized protein
STRINGPGSC0003DMT4000749340.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein