PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011078853.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 528aa    MW: 58775.9 Da    PI: 7.2062
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011078853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.58.8e-11236264533
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                     k  rr+++NReAAr+sR+RKka++++Le+
  XP_011078853.1 236 KTLRRLAQNREAARKSRLRKKAYVQQLET 264
                     7789***********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-9225280No hitNo description
SMARTSM003382.8E-8232295IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76234278IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-7236280No hitNo description
CDDcd147086.34E-21236288No hitNo description
PfamPF001706.1E-8236266IPR004827Basic-leucine zipper domain
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
PfamPF141442.8E-31328402IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MDSGGMSDDE HGGVHVKSSI SEKEKKVFEY PLMASGSNNN NNDHHHHHHH HHMITSTTEI  60
ALQQQHHHHQ MDHMISPFHH QTSTSTFPMM QSSPSSSSAP LPGTFNISKD GTAYDLGELD  120
QALFLYLDGQ DHHSAQEQRQ GSGVRPHTLN IFPSQPMHVE PSAAAAAPKG SSSSTGLVSP  180
SASGSQQRSS QPSMPSSNPR NDVASAPETT KVVKREGNRK GPTSSSEQGS KTPDPKTLRR  240
LAQNREAARK SRLRKKAYVQ QLETCRMRLT QLEQEIQRAR SQGFHLGGSA LLAGEQGLQV  300
AMGNGNSDAA NLFDMEYARW LEEHHRLMAE LRHAMEDHLS ENELRVLVDS CLALYDQVMN  360
LKNMIAKSDV FHLLSGMWKT PAERCFMWIG GFRPSELIKV IVTQIEPLTE QQVVGVCGLQ  420
QSTREAEEAL SQGLEALNQS LTHTITSDSL IIPPNMNTYM AQMALAINKL STLEGFLHQA  480
DNLRQQTLHR LDQILTTRQA ARCFLAIGEY FHRLRALSSL WVARPRQE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0533066e-55KJ053306.1 Sesamum indicum clone TilSSR_24507 microsatellite Sesame_24507 sequence.
GenBankKJ0345866e-55KJ034586.1 Sesamum indicum clone TilSSR_5787 microsatellite sesame_5787 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078853.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ415581e-127HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A068UPD70.0A0A068UPD7_COFCA; Uncharacterized protein
STRINGGLYMA03G29825.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-178bZIP family protein