PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074586.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 405aa    MW: 43085.3 Da    PI: 6.7985
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.61.8e-20304366163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ el +++ e++ l +++
  XP_011074586.1 304 ERELKRQRRKQSNRESARRSRLRKQAECDELARRAETLKEENASLRAELAHIRGEYEHLLAQN 366
                     89*******************************************************999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.4E-28196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.2E-49136271No hitNo description
Gene3DG3DSA:1.20.5.1703.5E-18297365No hitNo description
SMARTSM003381.6E-22304368IPR004827Basic-leucine zipper domain
PfamPF001707.1E-19304366IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.944306369IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-11307363No hitNo description
CDDcd147022.45E-22309359No hitNo description
PROSITE patternPS000360311326IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MGNSEADKSS KEGKEAKEPK TPPPQEQNSA ASGAAAADWT GFQAYSPIPP HGFLASSAQA  60
HPYMWGVQQF IPPYGTPPHP YVAMYPHGGI YAHPTLAPGS YPFSPFAMPS PNGVAEASGN  120
TPGNMEVDGK SSEGKEKLPV KRSKRSLGSL NMITGKNNES GKTLGSSANG VCSKSAESAS  180
EGSCEGSDIN SQNESPRKSG SHQDSDEPSQ NGHAAHSSQN GGSATPHSVV NQTMAIMPIT  240
AAGVVGGFPG PTTNLNIGMD YWAATPTSAA PAMHGKVPST PVQGGIVPTG SRDGVQSQLW  300
IQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELARRAET LKEENASLRA ELAHIRGEYE  360
HLLAQNASLK ERLGELPRQE DPRCGQDDRH SGDDAQHLGQ ADHTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1320326RRSRLRK
2320327RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074586.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074593.10.0bZIP transcription factor 16
SwissprotQ501B21e-157BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A068UTT90.0A0A068UTT9_COFCA; Uncharacterized protein
STRINGSolyc08g005290.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-146basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]