PlantTFDB
Plant Transcription Factor Database
v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074481.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TALE
Protein Properties Length: 625aa    MW: 69247.4 Da    PI: 6.9593
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.4e-094645011954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yps++++  L++++gL+++qV++WF N R +
  XP_011074481.1 464 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 501
                     664459******************************88 PP
2BELL98.94.1e-32324394171
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                     er+++q++k kLl +l+eVd rY +y+eq+q+++ sF+ ++g g a++Yt lA ka+SrhFrc+kdai++ 
  XP_011074481.1 324 ERTDHQRRKIKLLAMLDEVDTRYLRYCEQMQAMVYSFDSIVGQGGAAVYTGLARKAMSRHFRCMKDAIIGE 394
                     6899****************************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-50255393IPR006563POX domain
PfamPF075265.9E-44261391IPR006563POX domain
PROSITE profilePS5007112.309442505IPR001356Homeobox domain
SMARTSM003891.8E-9445509IPR001356Homeobox domain
CDDcd000868.55E-12445506No hitNo description
SuperFamilySSF466892.78E-17446513IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28448511IPR009057Homeodomain-like
PfamPF059206.7E-18462501IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MNSMSQSFHQ GIYNFPGTHE RAKQQGEWMI REQGGGFEPL PQADLDGQPP VYDTGGMLTE  60
IVNLPWRKAS TEVLDDQIQS SYRWPQKQQL SAAVVNEAAA DELPLINPQI TASSCTTSYL  120
QKLVPSSSDS NLQGFHLISP VPASNMEPQS QFTWIPGSSS RDMEDARTGR VLEGQGLSLS  180
LSSLRNLEAA KFEKITAANG ELFFPGQGIG ASCNNPYGSK DFATNQLLFN PPRLASSSSS  240
SGHGNQVHFG YVESARSTNF LRNSRYLRAA QELLEEFCSV GRGQLKNQKI KNQDRNPNSV  300
PDSGGVATGP SSSKDHHHPL AHAERTDHQR RKIKLLAMLD EVDTRYLRYC EQMQAMVYSF  360
DSIVGQGGAA VYTGLARKAM SRHFRCMKDA IIGEVKVSCE ALGEKDVNVG SGLTKGETPR  420
LKLLEQKYRQ QKALQHMGML DPESWRPQRG LPERAVNILR SWLFEHFLHP YPSEADKHLL  480
SRQTGLSKNQ VSNWFINARV RLWKPMVEQM YQQEFQDQDV QHSPAQQQEE EEPKPQENTN  540
APKPAEKGPA SKTTSEVGGA TSAASYEYRR FMENPEVGLG SDQFGLVGVG AQGGGGEVSL  600
TLGLRNSDNV PSRIGQLSIR DFQAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-17451509563Homeobox protein Meis2
3k2a_B3e-17451509563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0726477e-58KJ072647.1 Sesamum indicum clone TilSSR_43848 microsatellite Sesame_43848 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074481.10.0PREDICTED: BEL1-like homeodomain protein 4
SwissprotQ94KL51e-116BLH4_ARATH; BEL1-like homeodomain protein 4
TrEMBLK4BV620.0K4BV62_SOLLC; Uncharacterized protein
STRINGSolyc04g079830.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60721721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-116BEL1-like homeodomain 2