PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30138.m003906
Common NameRCOM_1466940
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 190aa    MW: 21589.2 Da    PI: 9.6807
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30138.m003906genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.91.1e-1392150563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    ++ +r+++NRe+ArrsR RKk++ieeL   v  L + N++L +++ +l ++ ++  +e+
  30138.m003906  92 RKLKRMISNRESARRSRIRKKKQIEELDCQVNHLRTMNHQLSEKVIHLLENNQQILQEN 150
                    5789*************************************************999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-1186146No hitNo description
SMARTSM003385.8E-1388152IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.47390153IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-1192144No hitNo description
PfamPF001702.9E-1292150IPR004827Basic-leucine zipper domain
CDDcd147028.37E-1593141No hitNo description
PROSITE patternPS00036095110IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MEPHEIKGFH YPPHANSSVP GLLSLSPTDN TLSYANLSQN PESSSSFFSR SFPSNSPIHF  60
PLHIFSTNTS PASADSSLNK TSNHQVGNSH ERKLKRMISN RESARRSRIR KKKQIEELDC  120
QVNHLRTMNH QLSEKVIHLL ENNQQILQEN SQLKERVSSL QLVLSDLLIP MRNVEESICN  180
PNRLRGETSN
Cis-element ? help Back to Top
SourceLink
PlantRegMap30138.m003906
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015571979.11e-135basic leucine zipper 43
TrEMBLB9RLH11e-134B9RLH1_RICCO; DNA binding protein, putative
STRINGXP_002514590.11e-134(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130442430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-32basic leucine-zipper 70