PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G078400.1
Common NamePHAVU_010G078400g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family G2-like
Protein Properties Length: 313aa    MW: 35088 Da    PI: 8.8343
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G078400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.3e-3161114255
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         prlrWtp+LH rF++av++LGG+e+AtPk +l+lm++kgL+++hvkSHLQ++R+
  Phvul.010G078400.1  61 PRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNMKGLSIAHVKSHLQMFRS 114
                         8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.45657117IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.9E-2857115IPR009057Homeodomain-like
SuperFamilySSF466897.7E-1460115IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-2261116IPR006447Myb domain, plants
PfamPF002496.2E-962112IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MGESRVSHCS KTSPSNIDEE ECERHANEDQ SKQNNNGGSS SNSTAEESEK KIRPYIRSKL  60
PRLRWTPDLH LRFIHAVQRL GGQERATPKL VLQLMNMKGL SIAHVKSHLQ MFRSKKVDDR  120
NQVFSNHTSL VEIGDKNIYN LSQLSMLQAY NPSQSSSYSY TNNNYPSYGF GDASFGVYEK  180
LVHIPFDWSN GISQAGSSIS GEQSTSKTRE PKYEFFSFGA CESLFTRFSN VDRTPSNNII  240
QQRAQNLMPM NPTTEMKTLK RKAQDTSLDL NLSLKLNTKM DAEGTKLEDH EAHSNLSLSL  300
CSQSSSSNLS RG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-1762116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1762116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1762116357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1762116357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-1762116458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G078400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-134AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007134813.10.0hypothetical protein PHAVU_010G078400g
TrEMBLV7AMH10.0V7AMH1_PHAVU; Uncharacterized protein
STRINGXP_007134813.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-49G2-like family protein