PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G131500.2
Common NamePHAVU_008G131500g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 230aa    MW: 25921.3 Da    PI: 9.2199
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G131500.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-11108150251
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +GV++  k+ +W A I++      +k+++lg+ g++eeAa ++++a+ 
  Phvul.008G131500.2 108 SMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSEEEAAHLYDRAAF 150
                         579**99..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.5E-4108165IPR001471AP2/ERF domain
PfamPF008471.6E-5108151IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-8109153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-6110159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGNSSFV TPLPLYCENL SSLENSTQQA KPKSEQPVLS DDASNLDSNT  60
AVLEEPGSSN VSGSSSSKEQ LIQPITGPPI KRRKRHRRKN LHNQEPCSMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSEEE AAHLYDRAAF MCGREPNFEL PEEEKRELSK FKWDEFLAMT  180
RQAITRKKHK RRLSPGPGNS HDMLPLPKDD WDTKQGVVSE DAEQETSMS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185192RKKHKRRL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G131500.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140665.11e-171hypothetical protein PHAVU_008G131500g
SwissprotQ56XP94e-44ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLV7B4E11e-170V7B4E1_PHAVU; Uncharacterized protein
STRINGXP_007140664.11e-143(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.24e-46ERF family protein