PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G103100.1
Common NamePHAVU_008G103100g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family G2-like
Protein Properties Length: 239aa    MW: 26715.2 Da    PI: 10.2542
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G103100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.61.2e-271370155
             G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv...kgLtlehvkSHLQkYRl 55
                        k+rlrWt+eLH+rFv av++LGG+++AtPk il+ mk      L ++hvkSHLQkYR+
  Phvul.008G103100.1 13 KERLRWTQELHDRFVVAVNRLGGPDRATPKGILKGMKAlgnSQLNIYHVKSHLQKYRI 70
                        68******************************99987622266**************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-251171IPR009057Homeodomain-like
SuperFamilySSF466894.3E-141270IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-201371IPR006447Myb domain, plants
PfamPF002491.3E-61569IPR001005SANT/Myb domain
PfamPF143793.7E-11102140IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MGSSRSRGSA TAKERLRWTQ ELHDRFVVAV NRLGGPDRAT PKGILKGMKA LGNSQLNIYH  60
VKSHLQKYRI SKLIPESPTR GKLEKRSISD ILPNFSSISA HQLKELLQIQ TEMQNRLSDK  120
TEVQRSLKVK IEAQGRFLER FGQSSHSKTI IGKACKSFAS STTAPLPSLS EESESLESQT  180
EKEHESVKKQ RISEEGVFPT SFEHASSTPP EFYNQTWNVP WSQLAAACQS TLDPSFLF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-191372157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-191272158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G103100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140328.11e-175hypothetical protein PHAVU_008G103100g
SwissprotQ9SJW03e-41PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLV7B3541e-174V7B354_PHAVU; Uncharacterized protein
STRINGXP_007140328.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-43G2-like family protein