PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G185500.1
Common NamePHAVU_007G185500g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family GeBP
Protein Properties Length: 359aa    MW: 41002.8 Da    PI: 5.1043
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G185500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.93.9e-25111208297
              DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 
                         + qrlw+++De+ lL+G +d+ +++g      ++d+  +y+ v+ +++++++++qlveK+rrLK+K k   +k  ++ke+   + ++q if
  Phvul.007G185500.1 111 QYQRLWTKQDEMELLKGYLDYMKQHGRattTLHNDVASLYDHVRPKLNVDFNRNQLVEKLRRLKRKHKLALDK-GKDKEVPKGNLQEQAIF 200
                         579********************99986666788***************************************.5555666677889**** PP

              DUF573  90 elskkiWg 97 
                         e+s+kiWg
  Phvul.007G185500.1 201 EISHKIWG 208
                         *******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.0E-24113208IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MLSPLVSWFL SPSSSSSSSE EEQNLDINTH HENHQNFNIQ DHENDQYLSS CDVDDTIPLA  60
LAVPTASPAV TVAFPADDER SMVPGTTTTA TTFVTRSKGQ CSNKYSGVVR QYQRLWTKQD  120
EMELLKGYLD YMKQHGRATT TLHNDVASLY DHVRPKLNVD FNRNQLVEKL RRLKRKHKLA  180
LDKGKDKEVP KGNLQEQAIF EISHKIWGND TDNLLDQDSF DGASGRTPES RYLGGNVKVK  240
IDQLDNSDEI DERVPKRLRL HDAEDENRDY EQNNGGNIQG FIEETMRSCF SPLLKEVLDE  300
AHQQPPPELV PIPLPLCPED VDHAQWTKRG ILELEMYLKR LELLQDQIKA RLEELRSR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007144807.10.0hypothetical protein PHAVU_007G185500g
TrEMBLV7BJP40.0V7BJP4_PHAVU; Uncharacterized protein
STRINGGLYMA20G37220.11e-170(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1630579
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.17e-26DNA-binding storekeeper protein-related transcriptional regulator