PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G212700.1
Common NamePHAVU_003G212700g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 179aa    MW: 19308.7 Da    PI: 4.6911
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G212700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2445.4e-141361255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         y+G+r ++  g+Wv eIr+p++   + r++lg+f t+e+Aa+a++ a+++l+g
  Phvul.003G212700.1 13 LYHGIR-CR-GGKWVTEIREPRK---TNRIWLGTFLTPEMAAAAYDVAALALKG 61
                        699999.55.7*********854...49**********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.84E-131271No hitNo description
PfamPF008471.0E-71261IPR001471AP2/ERF domain
PROSITE profilePS5103218.3071369IPR001471AP2/ERF domain
SMARTSM003802.4E-231377IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-161371IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-241371IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MASSSSSSKR HPLYHGIRCR GGKWVTEIRE PRKTNRIWLG TFLTPEMAAA AYDVAALALK  60
GGEAVLNFPD SIGRYPVPAS KSPADIRSAA IAAAELMKPE ASHNNANAVA QSDNTEGDGY  120
YNVAAPLNET EFVDEEAIFS MPSLLIDMAE GMLLTPPRMS SPSDYWIENS GGENLWNF*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G212700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007155566.11e-129hypothetical protein PHAVU_003G212700g
SwissprotQ9CAN91e-42ERF26_ARATH; Ethylene-responsive transcription factor ERF026
SwissprotQ9SJR01e-42ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLV7CE481e-128V7CE48_PHAVU; Uncharacterized protein
STRINGXP_007155566.11e-129(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-41ERF family protein