PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G189900.1
Common NamePHAVU_003G189900g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family Nin-like
Protein Properties Length: 272aa    MW: 31728.9 Da    PI: 5.2966
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G189900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.52.1e-26136184452
              RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          +s +++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl
  Phvul.003G189900.1 136 MLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSL 184
                         68999*****************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151918.565119204IPR003035RWP-RK domain
PfamPF020421.2E-21137184IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MESHPLMGWS SYYQIDEKSF PFTCQFSYSE ISGVYPPLHD LAIQEYHHDA VPLMEYYPSD  60
PLYETLAIEP TPSLRADYDF YDINKGLSVW NEVDAVFDTE VGFLFRKNEE RGGGLEEMME  120
NKQGREERTN SSSSRMLSRK TISQYFYMPI TQAARELNVG LTLLKKRCRE LGIRRWPHRK  180
LMSLQTLINN VQELLKEEGP ESEEKLKYAI ETLESEKKLL EEMPDIELED NTKRLRQACF  240
KANYKKRKLG QREPQCSSWS ACASHFSTYI P*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G189900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150347e-96AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007155308.10.0hypothetical protein PHAVU_003G189900g
TrEMBLV7CAU00.0V7CAU0_PHAVU; Uncharacterized protein
STRINGXP_007155308.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61843052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-43RWP-RK domain-containing protein