PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G137600.1
Common NamePHAVU_001G137600g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 219aa    MW: 24504.2 Da    PI: 4.6751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G137600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.75e-122775355
                 AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                        ++GV++d ++g+W A+     ++  +  r+ lg f+t+eeAa+a++ a  +l+g
  Phvul.001G137600.1 27 FRGVSRDFSTGKWQAY---LDKG--NdDRIFLGLFDTEEEAARAYDFASIRLKG 75
                        8***************...5442..34*******************88777765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.23E-172582No hitNo description
SuperFamilySSF541711.57E-142584IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-142683IPR001471AP2/ERF domain
SMARTSM003801.7E-142689IPR001471AP2/ERF domain
PROSITE profilePS5103216.6872683IPR001471AP2/ERF domain
PfamPF008471.2E-72775IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MTDMSKTEVV DSVRMLSFSF MKSISMFRGV SRDFSTGKWQ AYLDKGNDDR IFLGLFDTEE  60
EAARAYDFAS IRLKGLSAIT NFSIRFYDVD AILLGQTDDE KMVYESKVTV PVEDTQHFEV  120
FQNITGQGSS TMVYGSNEGN LNRVGEEEVE MPLMSGNTEE QANSVALASL EGNSSTTNVP  180
LQRESDTTRN VDRSGGQRST ARERFNAYKK FIKRPRPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212216KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G137600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150379e-52AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007162260.11e-160hypothetical protein PHAVU_001G137600g
TrEMBLV7CVX01e-159V7CVX0_PHAVU; Uncharacterized protein
STRINGXP_007162260.11e-160(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3520422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.13e-25AP2 family protein