PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.016G048000.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family G2-like
Protein Properties Length: 228aa    MW: 24973.5 Da    PI: 5.8799
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.016G048000.3genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like26.41.6e-08174198125
             G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                         k+r+rWt+ LHe+F+++v++LG  +
  Potri.016G048000.3 174 KKRIRWTQGLHEKFIKCVNSLGCCK 198
                         78*******************8654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-6172201IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGEVSQSQDV EPATSTNIIP SQFDQLAPAF CISECLFDLQ QDDDYEFPTF PSCSQVPGPN  60
DAKMSSNQSS RGNIFDESSW QTVLRPYLFS NQHHKYCEKT QKHLSSINLG GSTSLSLERV  120
QLLGDNATLI GRPLQPTSDR QNDPEQLESS TRHLGDGSST SSGSGSSGPI FSSKKRIRWT  180
QGLHEKFIKC VNSLGCCKSK TKGHTEDDGN ERIDHRSGQK SLAEISI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.016G048000.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024443215.11e-164uncharacterized protein LOC18109673 isoform X3
TrEMBLA0A2K1XAU41e-166A0A2K1XAU4_POPTR; Uncharacterized protein
STRINGPOPTR_0453s00230.11e-125(Populus trichocarpa)