PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.010G141700.1
Common NamePOPTR_0010s15160g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family CAMTA
Protein Properties Length: 916aa    MW: 102868 Da    PI: 8.2187
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.010G141700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1164.51.8e-51301463118
                CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                         +e ++rwl+++ei+a+L n++ +++  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++n+
  Potri.010G141700.1  30 EEsRTRWLRPNEIHAMLCNYKLFTINVKPVNFPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNQ 120
                         4459*************************************************************************************** PP

                CG-1  93 tfqrrcywlLeeelekivlvhylevk 118
                         tf rrcywlL+++le+ivlvhy+e++
  Potri.010G141700.1 121 TFVRRCYWLLDKSLEHIVLVHYRETQ 146
                         ***********************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.43425151IPR005559CG-1 DNA-binding domain
SMARTSM010765.6E-7228146IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-4532144IPR005559CG-1 DNA-binding domain
PfamPF018333.2E-4373459IPR002909IPT domain
SuperFamilySSF812963.5E-11374460IPR014756Immunoglobulin E-set
CDDcd002046.53E-15558668No hitNo description
Gene3DG3DSA:1.25.40.201.4E-15558671IPR020683Ankyrin repeat-containing domain
PfamPF127961.0E-6558638IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.1E-16560671IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.247576641IPR020683Ankyrin repeat-containing domain
SMARTSM002484.0E-6609638IPR002110Ankyrin repeat
PROSITE profilePS5008811.701609641IPR002110Ankyrin repeat
SuperFamilySSF525405.04E-6720823IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001551772794IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.053773802IPR000048IQ motif, EF-hand binding site