PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta002857
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family NAC
Protein Properties Length: 311aa    MW: 34553 Da    PI: 5.5167
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-41780PU_refplantGDBView CDS
gnl|UG|Pta#S25560374PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.82.4e-07128103128
        NAM 103 kktLvfy..kgrapkgektdWvmheyrl 128
                kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Pta002857   1 KKILVLYtnFGKHRKPEKTNWVMHQYHL 28 
                89*****5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.653147IPR003441NAC domain
SuperFamilySSF1019415.23E-9147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
KKILVLYTNF GKHRKPEKTN WVMHQYHLGV HEEEKEGELV VSKVFYQTQP RQCNWERTSS  60
DIAGSAITRN QSQEMTPIHP GDASFKNYPA AVMVGKAMTD INPGPSCTYN VDGVQQASAD  120
QFTFASCPRS LDEGISDSTT GKGSESSHCT PHSCDEHEEH EHDQHNAIND ALKRGFPMSA  180
GGGGHEIIAL RFNRRSDGVN VELKSSGRHR GQSSNADVTC MAGESQEPDH DGDLDAVEGS  240
LSRPQVLIPH EKIQNVAGKS FPQKLSFEED IFMYPTGMKE APALTNSQET DWLKYNTYWP  300
ESDSPENSRM I
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.142410.0root| shoot| xylem