PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta000696
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family Trihelix
Protein Properties Length: 239aa    MW: 27049.7 Da    PI: 8.2154
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-52330PU_refplantGDBView CDS
gnl|UG|Pta#S26629965PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.12.5e-092087268
   trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikege 68
               W++  + +L+   +++  +++rg+l k++W ++++++ +    + s +qCk kw+ l+k y k k + 
  Pta000696 20 WPNTSIDVLLLKFEDTCFSVSRGRLGKTHWGRIADAVNAVCSaNYSGVQCKYKWNRLKKSYNKAKLHG 87
               9999999999999************************88776377*****************998655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.3E-920100No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MALKRLETPK SSRAHKEALW PNTSIDVLLL KFEDTCFSVS RGRLGKTHWG RIADAVNAVC  60
SANYSGVQCK YKWNRLKKSY NKAKLHGETS RFVHYKRVER IVQKASGEKL HEDDEEEEEE  120
EEEMASEDDG VDSICEAAST ESKPSSVSMS ATEDDDVPRR PQKRGVTLKS FGNKMEQSMN  180
NLAQSMKNIE KTRTDKMMKL LDAQMEITSI LVQNNKRVSF GLSVLIVHCQ SLFVSLLGK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.179860.0embryo| needle| root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LNY61e-136B8LNY6_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-08Trihelix family protein