PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G224800.1.p
Common NamePRUPE_ppa023368mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 155aa    MW: 17095.7 Da    PI: 8.2129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G224800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.6e-191969255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                        +y+GVr ++ +g+++AeIrd +    + +r +lg+f ta+eAa+a+++a+ +++g
  Prupe.8G224800.1.p 19 KYRGVRIRP-WGKFAAEIRDSTR---QgARLWLGTFNTAQEAARAYDRAAFSMRG 69
                        8********.**********322...24*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.6551977IPR001471AP2/ERF domain
PfamPF008473.2E-141969IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-301978IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-221978IPR016177DNA-binding domain
SMARTSM003801.2E-321985IPR001471AP2/ERF domain
CDDcd000181.60E-261977No hitNo description
PRINTSPR003672.2E-102031IPR001471AP2/ERF domain
PRINTSPR003672.2E-104359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MERGRSRGKA REEGQRDVKY RGVRIRPWGK FAAEIRDSTR QGARLWLGTF NTAQEAARAY  60
DRAAFSMRGP LAILNFPSEY GLPEAEHSTS AASCSSSCSS SSSSSSSSNF SSSSTLHNNV  120
TTRTETGREI FEFEYLDDSV LEDLLDFDNK SKSK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-3411401114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G224800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007198983.11e-109ethylene-responsive transcription factor ERF096
SwissprotQ9LTC52e-40ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLM5VGT01e-108M5VGT0_PRUPE; Uncharacterized protein
STRINGEMJ001821e-109(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-28ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]