PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G198700.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 170aa    MW: 18998.7 Da    PI: 10.9055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G198700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-11108147349
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                          +GV++  k+ +W A I++      +k+++lg+ g+ eeAa++++++
  Prupe.8G198700.2.p 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRY 147
                         79**98..47*********4.....5*******************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-5107147IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-7108153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-4110148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGVSPVL DPLPRACDNG TVPQNFSRTN PVSVHPMPSN DANQPDGNAS  60
VKVEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRYNCI FANMNNLYGM STIRNSKNV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2296384e-38KP229638.1 UNVERIFIED: Boehmeria nivea AP2/ERF domain-containing protein-like (ERF15) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201882.11e-106hypothetical protein PRUPE_ppa011812mg
SwissprotQ56XP91e-18ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM5VQ521e-106M5VQ52_PRUPE; Uncharacterized protein
STRINGPOPTR_0002s24750.11e-53(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.21e-25ERF family protein