PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G198700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 26301.6 Da    PI: 9.5675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G198700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-12108149351
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Prupe.8G198700.1.p 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149
                         79**98..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-6107150IPR001471AP2/ERF domain
SMARTSM003801.3E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-8108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGVSPVL DPLPRACDNG TVPQNFSRTN PVSVHPMPSN DANQPDGNAS  60
VKVEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAMTR  180
HAITNKKHRR RPGAESHKRS ETPLENGDWD DKEEVDSLSA SEDMEQDMLG S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235440.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_008235441.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP92e-41ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM5VQ521e-139M5VQ52_PRUPE; Uncharacterized protein
STRINGPOPTR_0002s24750.11e-102(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-48ERF family protein