PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G097100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 298aa    MW: 34395.5 Da    PI: 5.9346
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G097100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.81.3e-1681412128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyW 83 
                         p GfrFhPtd+e+v  +L+  + +++    + +++i+ +++  +k+eP+++ +k+ +    ++++yf s  +k ++  kr  r + + g+W
  Prupe.8G097100.1.p   8 PLGFRFHPTDKEIVGSFLHTLLVDRNpliPPYSNFIRACNLfgNKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDRsIGHGGTW 96 
                         89******************998888797666778****9833589*****7544333335668888888877655..68888567799** PP

                 NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++t + k +     + + +g k+ + + +  + + e+t W+++ey+l
  Prupe.8G097100.1.p  97 SETESFKLIEYDngNPNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 141
                         ********9998444456********984..334469********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-194165IPR003441NAC domain
PROSITE profilePS5100522.5857166IPR003441NAC domain
PfamPF023652.0E-118141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MAHHQNVPLG FRFHPTDKEI VGSFLHTLLV DRNPLIPPYS NFIRACNLFG NKLEPSEIWN  60
KYGGPQLVDQ DLYFLSGLKK LTPKRMDRSI GHGGTWSETE SFKLIEYDNG NPNPIGRKRK  120
FRYENKGSEE HTWWLLDEYS LFVGPKNDYN DRSYDFDFVI CRMRKNDRAL SKEINLKRSS  180
QDQVQKKRST NKKMKKDHQM GSTEESSSLV QQGYSSSITG GELVVSYDDV DPNDLTFFEN  240
NPIFNIEQIL CETKVENPCS PSNFENVNSS YSKWTESYME ELMACIEDIN CTSDSCR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G097100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007199045.20.0protein SOMBRERO
TrEMBLA0A251MVR90.0A0A251MVR9_PRUPE; Uncharacterized protein
STRINGXP_008236996.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1903626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.19e-09NAC family protein