PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G243600.1.p
Common NamePRUPE_ppa010601mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 244aa    MW: 26570.6 Da    PI: 7.6046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G243600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-19553153
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                        ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Prupe.7G243600.1.p  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
                        59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.99E-35565No hitNo description
SMARTSM003805.3E-39669IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-20665IPR016177DNA-binding domain
PfamPF008478.7E-12650IPR001471AP2/ERF domain
PROSITE profilePS5103221.878663IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-33664IPR001471AP2/ERF domain
PRINTSPR003671.6E-10718IPR001471AP2/ERF domain
PRINTSPR003671.6E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPISTTQTN TNTATAAAAA MAVGSDPRGS SSDLDHSLSE PKGLSEILHA KLRKCSNLPS  120
PSMTCLRLDN ESSHIGVWQK RAGQRSDNSN WVMTVQLGKK KNSNNTNAAD DHGQSISSSS  180
PLIMSTSESS ASTSSARAPE LISEMDEEEK IALQMIEELL NRNCPSPSNS SFGIQPGEES  240
FYL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-16564161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324593e-61GU732459.1 Malus x domestica AP2 domain class transcription factor (AP2D35) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202491.10.0hypothetical protein PRUPE_ppa010601mg
SwissprotQ9XI339e-74WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLM5WA650.0M5WA65_PRUPE; Uncharacterized protein
STRINGPOPTR_0018s13130.12e-92(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-57ERF family protein