PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G023300.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 236aa    MW: 25712.9 Da    PI: 6.788
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G023300.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.6e-1618462755
             G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                        AtPk +l++m+v+gLt++hvkSHLQkYRl
  Prupe.7G023300.5.p 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46
                        9***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.1E-151847IPR009057Homeodomain-like
TIGRFAMsTIGR015573.8E-111847IPR006447Myb domain, plants
SuperFamilySSF466893.4E-61846IPR009057Homeodomain-like
PfamPF143791.2E-2478124IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MTASSTPLRN SVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKYL PESPADGSKD  60
EKKGSGDSLS CSDSSPGVQI NEALRMQMEV QKRLHEQLEV QRQLQMRIEA QGKYLQKIIE  120
EQEKLGGVLK GSDALPSAED KQKPSQLETA GDASATPSSP RKKQRVDDGL PDGCTTSNVP  180
PKADQKNEFV GQWDRDLYGS DGGFGFNLQR EFKERDGDAA QKAPMELDPL CGSKQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G023300.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020424094.11e-173myb family transcription factor PHL7 isoform X2
SwissprotQ9SJW08e-55PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A251N5I01e-172A0A251N5I0_PRUPE; Uncharacterized protein
STRINGEMJ036011e-158(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.19e-52G2-like family protein