PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G014100.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 408aa    MW: 44963.4 Da    PI: 4.6618
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G014100.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.81.6e-17108456128
                 NAM  56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + w+ Fs+ d kya+++r nrat +g+Wk tgk ++v+s+   ++++  k+tL+f++gr +k+++t Wv +ey l
  Prupe.7G014100.4.p  10 RAWFSFSRPDYKYANSSRCNRATGKGFWKITGKPRQVKSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 84 
                         68*************************************866566677889**********************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.4661107IPR003441NAC domain
SuperFamilySSF1019411.03E-218107IPR003441NAC domain
PfamPF023652.2E-6983IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MFPDSPYQPR AWFSFSRPDY KYANSSRCNR ATGKGFWKIT GKPRQVKSRQ LPKSVTCKKR  60
TLTFHEGRVS KSRNTGWVRQ EYYLTPTDPG SNPNQLSGFV LCRMKNKSTD NESDDKKQQD  120
VSICVESADP GIAGCMASNS ELDQAAGIHL IPEAEEHLTY KELEHVLLGS GNQNDGEPNG  180
FVSSDFDDMI QELCAKGGEY LDSPSPPERP HQHQLPQLGN VPVTGDYVGS NSNNQAAAIN  240
HMIPHPEDFL TYKELEHVLG TCNPDAGEPG GCVSSNMLQK LCAQLGEELD SPIPPPGPPE  300
LGNATYVYTD ECSSWPSPIG DNDSSLPNKN SIPTNYESKP VSYDSKPVSN TASNFENQTR  360
ISEVYSQAEE NLESFFRQFE LEGDFLHANN YIGCNESQSA TLFPQSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-111011271170NO APICAL MERISTEM PROTEIN
1ut4_B7e-111011271170NO APICAL MERISTEM PROTEIN
1ut7_A7e-111011271170NO APICAL MERISTEM PROTEIN
1ut7_B7e-111011271170NO APICAL MERISTEM PROTEIN
4dul_A7e-111011271170NAC domain-containing protein 19
4dul_B7e-111011271170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G014100.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020425054.10.0protein NTM1-like 9
RefseqXP_020425055.10.0protein NTM1-like 9
TrEMBLA0A251N4Y40.0A0A251N4Y4_PRUPE; Uncharacterized protein
TrEMBLA0A251N4Z20.0A0A251N4Z2_PRUPE; Uncharacterized protein
STRINGEMJ060820.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.24e-19NAC domain containing protein 50