PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G004900.1.p
Common NamePRUPE_ppa016109mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 315aa    MW: 34636.3 Da    PI: 5.395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G004900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-184291255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Prupe.7G004900.1.p 42 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 91
                        799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.12E-194299IPR016177DNA-binding domain
PROSITE profilePS5103219.5854299IPR001471AP2/ERF domain
PfamPF008476.6E-134291IPR001471AP2/ERF domain
SMARTSM003801.6E-3542105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-284299IPR001471AP2/ERF domain
CDDcd000186.77E-324298No hitNo description
PRINTSPR003671.2E-74354IPR001471AP2/ERF domain
PRINTSPR003671.2E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEFQFQQHNQ ICFPAAANKA VGIPMAKVGK LKGRTRSNNA NKFVGVRQRP SGRWVAEIKD  60
TTQKIRMWLG TFETAEEAAR AYDEAACLLR GSNTRTNFIT HVSLDSPLAS RIRNLLNTKK  120
GGSSKQGIEQ TSSSIAYHDD MNASHPPISS TTSSDKYMTS NIRTASTSTC NSTSSGSDTL  180
SSEVFQDSQL FDDVYRPDLR HCNEEFELSS SASQSNLSWD GFQTGVDGFS FAQQVFDLPK  240
HQAATAASSS TTTTTTITTA AEADSEFLEF ERMKVERQIS ASLYAMNGVQ EYMDTVYDPN  300
EPSWDLPPLC PLFC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202908.10.0hypothetical protein PRUPE_ppa016109mg
TrEMBLM5VRY30.0M5VRY3_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g07250.t011e-110(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-28related to AP2 11