PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G165700.1.p
Common NamePRUPE_ppa006595mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 405aa    MW: 43314.9 Da    PI: 7.6348
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G165700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.9e-20193242255
                 AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  Prupe.6G165700.1.p 193 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDEAALRFRG 242
                         7********.**********66.....56*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.3E-32193251IPR001471AP2/ERF domain
PROSITE profilePS5103225.409193250IPR001471AP2/ERF domain
PfamPF008472.5E-13193242IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-22193251IPR016177DNA-binding domain
SMARTSM003804.8E-35193256IPR001471AP2/ERF domain
PRINTSPR003673.0E-11194205IPR001471AP2/ERF domain
CDDcd000184.94E-15201252No hitNo description
PRINTSPR003673.0E-11216232IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009658Biological Processchloroplast organization
GO:0009749Biological Processresponse to glucose
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MCVLKVAEKD QRAARHSNIG TEHSIEEWLY EPLVFSQQLR QRQRQRGGGS GGGGGGSEIL  60
ASAGSSMLLR LDREREMSAM VSALAHVVAG DEELAAAESS LVTNRQSEDV GGGLISSSVG  120
GSDSGTKRGR EEEEGGGGQS VTRLCRAFGE FPEQSSSPVL GEGSSKTPPT QTAFPPSTFV  180
YSATQIAEPI RRRYRGVRQR PWGKWAAEIR DPFKAARVWL GTFETAEAAA QAYDEAALRF  240
RGNKAKLNFP ENVRLRTPIA DSPVTQLTNS APPNTLLSVA TSTEPIVHSQ AFQSMQHSSH  300
EASRNLLGYC KPVDVQRQQP MSLYDQMLLS SSATPSVSSS SSSPLASSVS SSSSSPPPPA  360
FSSLFWTQSS LPLRPATGDQ NSTAADFQSP QWSSSSHYSA PFSR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-23192253466ATERF1
3gcc_A6e-23192253466ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00584DAPTransfer from AT5G64750Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695580.0KT369558.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 26 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007221228.10.0hypothetical protein PRUPE_ppa006595mg
TrEMBLM5X8N30.0M5X8N3_PRUPE; Uncharacterized protein
STRINGPOPTR_0005s08940.13e-56(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-27ethylene response factor 110