PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G129100.7.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 484aa    MW: 53382 Da    PI: 6.417
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G129100.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10212252545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Prupe.6G129100.7.p 212 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDL 252
                         788*************************9877777766666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-7208271IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.174210254IPR004827Basic-leucine zipper domain
PfamPF001701.9E-7212253IPR004827Basic-leucine zipper domain
CDDcd147083.16E-22212258No hitNo description
SuperFamilySSF579591.29E-6212254No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-7213255No hitNo description
PROSITE patternPS000360215230IPR004827Basic-leucine zipper domain
PfamPF141445.1E-32293368IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MAFISATCPD SSFFLEYKDE NGLRKSCMAS HRVGETATGL SESGPSNHHV PYAVLHGMNA  60
PSTSFLNQEG SAFDFGELEE AIARQVRNDE AQAPLFTGRP AATLEMFPSW PMRFHQTPRG  120
SSKSGGESTD SGSQVNTLTS KGEGGQLEPE SPISKKASSS DHQQTFDQKH LQFQQQQQLQ  180
AQDMAISDSS RGGAVGVGAS QSQSAAKPSQ EKTLRRLAQN REAARKSRLR KKAYVQQLET  240
SRIKLTQLEQ DLQRARAQGL FLGGCGGGLG NISSGAAIFD MEYARWLEDD HRHMSELRTG  300
LQAHLSDSDL RVIVDGYISH YDEIFQLKGV AAKSDVFHLI TGMWTTPAER CFLWMGGFRP  360
SELIKMLTAQ LDPLTEQQFM GIYSLQQSSQ QAEEALTQGL EQLHQSLVDT IAGGPVIDGM  420
QQMAVALGKL TNLEGFVRQG CHYHALGQIF RQMIYDIIQI IDWSHPLHAC HVCSWLYWVI  480
IIS*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}.
UniprotTISSUE SPECIFICITY: Mostly expressed in stems, inflorescence apex and flowers, and, to a lower extent, in seedlings, leaves and siliques. {ECO:0000269|PubMed:20805327}.
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G129100.7.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008228573.10.0PREDICTED: transcription factor TGA2 isoform X2
SwissprotQ93XM61e-164TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A251NPQ10.0A0A251NPQ1_PRUPE; Uncharacterized protein
STRINGXP_008228563.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-143bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]