PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G129100.3.p
Common NamePRUPE_ppa004537mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 489aa    MW: 53873.3 Da    PI: 6.7995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G129100.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10185225545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Prupe.6G129100.3.p 185 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDL 225
                         788*************************9877777766666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-7181244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.174183227IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-6185227No hitNo description
PfamPF001701.9E-7185226IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-7186228No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141445.2E-32266341IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MASHRVGETA TGLSESGPSN HHVPYAVLHG MNAPSTSFLN QEGSAFDFGE LEEAIARQVR  60
NDEAQAPLFT GRPAATLEMF PSWPMRFHQT PRGSSKSGGE STDSGSQVNT LTSKGEGGQL  120
EPESPISKKA SSSDHQQTFD QKHLQFQQQQ QLQAQDMAIS DSSRGGAVGV GASQSQSAAK  180
PSQEKTLRRL AQNREAARKS RLRKKAYVQQ LETSRIKLTQ LEQDLQRARA QGLFLGGCGG  240
GLGNISSGAA IFDMEYARWL EDDHRHMSEL RTGLQAHLSD SDLRVIVDGY ISHYDEIFQL  300
KGVAAKSDVF HLITGMWTTP AERCFLWMGG FRPSELIKML TAQLDPLTEQ QFMGIYSLQQ  360
SSQQAEEALT QGLEQLHQSL VDTIAGGPVI DGMQQMAVAL GKLTNLEGFV RQADNLRQQT  420
LHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWASRPRE SMISDDNSCQ TTTDLQMVQP  480
SQNHFSSF*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}.
UniprotTISSUE SPECIFICITY: Mostly expressed in stems, inflorescence apex and flowers, and, to a lower extent, in seedlings, leaves and siliques. {ECO:0000269|PubMed:20805327}.
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G129100.3.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422805.10.0transcription factor TGA9 isoform X3
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A251NPJ70.0A0A251NPJ7_PRUPE; Uncharacterized protein
STRINGEMJ062430.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]