PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G064700.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 705aa    MW: 77761.3 Da    PI: 10.1648
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G064700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.81.3e-13643695255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++  g++ AeIrdp   +   rkr+slg + t eeAa a++ a+++++g
  Prupe.6G064700.4.p 643 HYRGVRQRR-FGKFTAEIRDPA--KkvSRKRVSLGCYETSEEAALAYDSAAQRIHG 695
                         7*****999.9*********84..34335*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.6E-23642703IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-16643703IPR016177DNA-binding domain
PfamPF008473.4E-10643695IPR001471AP2/ERF domain
PROSITE profilePS5103219.968643703IPR001471AP2/ERF domain
SMARTSM003809.9E-22643704IPR001471AP2/ERF domain
CDDcd000188.01E-23643704No hitNo description
PRINTSPR003672.6E-9644655IPR001471AP2/ERF domain
PRINTSPR003672.6E-9685704IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    Send to blast
MHMAGSSGCA FGNSPVVCNR CGIQIVLRQA QEHAQNCPGV HPQAQQADGA LDTSASGTSA  60
TADQTQAATQ SGVAMSQVQI FQITIVTPPG SDPDQEANSS SQAVVQAAVQ TAEQWYQHQQ  120
QYQQYYQAAV QQSQQRHLQS HPPYGTVQHQ PRAYLQSRPQ TQPSLRAQLS QSQAQPKPQI  180
QPPHVQVPVA SQTQNQAQVN KQQQLRPAVQ TYPAARRQPL PQPQYFQAPS HSQPHPQHVQ  240
MPHNQQAQIQ QHTHSKIHPQ HHPISLPQPH SQPQPHPQLQ RLPQPHPQLH PSQPMNTTVQ  300
PQTQHPSSHA VTGNHLYPQP HLHQPVQSGA PQQRTMDMQS HGVPHSQSQT PVQIQSQPPQ  360
QPPVMRLPPS HIPNQQQPAL LPSPGQIRNI NPAQQQPVHS YAQQPGNTVQ QRPLMHAVQR  420
SIPRQYLHHQ PYVQQQPPTQ LHPRGQSHSF PLHVHAYTQS QRNIALSQGI QLSQSNLGGS  480
RRPMMPIHGV QSQTSVQTAG GLHMRPVHPT VNLPSTNHSN MVRTKNLVQS GASWRPTTSE  540
RHAEEESESS AQQIAKNVTH DVGTASAVVG DAEVKTVKSD MDMKSIDNEN KPTGEDKTNH  600
GDTSSKEIPD IHALENGESV SQSMLNAADQ NKVRKSGVAR GRHYRGVRQR RFGKFTAEIR  660
DPAKKVSRKR VSLGCYETSE EAALAYDSAA QRIHGSKALL NFPI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-22639704164ATERF1
3gcc_A4e-22639704164ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.134220.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G064700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695330.0KT369533.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020423112.10.0chromatin modification-related protein eaf-1
TrEMBLA0A251NL810.0A0A251NL81_PRUPE; Uncharacterized protein
STRINGXP_008220086.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.18e-15ethylene responsive element binding factor 1