PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G220700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 437aa    MW: 49386.8 Da    PI: 6.6729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G220700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.41e-14188233352
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                         ykGVr++k +gr++AeIrdp     + +r +lg+f taeeAa+ + + +++
  Prupe.5G220700.1.p 188 YKGVRRRK-WGRYAAEIRDPI----QrRRKWLGTFATAEEAAAVYQKKKLE 233
                         9****998.**********83....35***************999877765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.75E-15186234IPR016177DNA-binding domain
PROSITE profilePS5103218.426187251IPR001471AP2/ERF domain
SMARTSM003807.8E-17187257IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-19187234IPR001471AP2/ERF domain
PfamPF008474.9E-8188226IPR001471AP2/ERF domain
PRINTSPR003672.0E-7188199IPR001471AP2/ERF domain
PRINTSPR003672.0E-7210226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MSSRFHLLTG AQKKLWTSYH CLSCTLVLLS TFCMQYWSHG HTLKQSSPLF SMPLRSKSFP  60
FALPLGFRSF DLKKMPGFKT LVLNQHVKLN KLKTKQPNKE ENTSSVKRIR IIYNDPDATD  120
SSSDDEEYDG KEDRLLHDKR FVSEILVVDT KYESSADVLS HCKTNRGKIG VSMNFYDSKK  180
TKRSSSMYKG VRRRKWGRYA AEIRDPIQRR RKWLGTFATA EEAAAVYQKK KLEFDSIQSL  240
GKTQRDYQNL QLSDKDKGAF ESFQLTERTK HEFQGIPLSE ESQDSSGDAA IETFSAEEAE  300
RVFCHPSPSS VLEISGTASL GIGLKQAKEE SSVEVFGGEG SVQPCFEEEL SILKFPVQPM  360
LPLDIKQLDL GCGENYVFSS LDQFFDGMSD IVDYPAFNDG NGEVICLPAL DSDFGQQDFA  420
WIDQKPEHGM PMKFCS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188194KGVRRRK
2192211RRKWGRYAAEIRDPIQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G220700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695520.0KT369552.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020420005.10.0ethylene-responsive transcription factor ERF118 isoform X1
TrEMBLA0A251PC350.0A0A251PC35_PRUPE; Uncharacterized protein
STRINGEMJ102030.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-27cytokinin response factor 4