PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G187800.1.p
Common NamePRUPE_ppa021195mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 684aa    MW: 73393.6 Da    PI: 7.6027
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G187800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.4e-30287346159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  Prupe.5G187800.1.p 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVQRCAEDMSILITTYEGTHNHP 346
                         58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.7E-32272348IPR003657WRKY domain
SuperFamilySSF1182902.62E-27280348IPR003657WRKY domain
PROSITE profilePS5081128.346282348IPR003657WRKY domain
SMARTSM007742.4E-36287347IPR003657WRKY domain
PfamPF031061.1E-26288346IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    Send to blast
MEAALGKSNP HGGSEKEEKR LVLESSSLAD HDDQEAAGSK EDTLLKVGNG GSCQENNEMK  60
SSSPTQKDLS SSKQISTTSN TKVEPDHSMA STSSSRKEQD YQLESARAEM GEVREENQRL  120
KKYLDRITDE YQTLQMQLYD IQEKANKSKD VTIASPNNIY NHQDDESEMV SLSLGSFSSR  180
PKKDEKNKNR STSSQGKENE SDRESLSLGL DCKYEAPKSS ATTTEVPLSN SSPASSLEEV  240
PKEEAGQTWP PKKVLKTARS AEDEVAQQNP VKKARVSVRA RCDTPTMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTIAPSCP VRKQVQRCAE DMSILITTYE GTHNHPLPMS ATAMASTTSA  360
AASMLLSGSS SSARSGLNPS VGAATTAAHD LHGYNFYLSD NSKSRFFIPN SSLSSSLPTI  420
TLDLTSNPPP PSSSSNPLSH FNKFSSSSNS SHQLYPPTSL NFGSNSESNT NMSWSNGFLS  480
YGAQLPPHNI NNKNQIGSLS SHGIRQQQQP LQNNIYQNYM HKNNLNPTPP PHPSQGASPH  540
QFQPDPIAAA TKAITADPSF QSALAAALSS IIGSNSNVGT GGTTGMLGNN NNQAGGGDNI  600
NMAQKFKWGD QFAGSTTTSS SPYLQTQIGN NSTIGCASSY LNKTTSANSQ PGSLMFLPPS  660
LPFASAPKSA STSPGDTRDH KSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-20274348174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G187800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020418946.10.0probable WRKY transcription factor 61
TrEMBLA0A251PAI10.0A0A251PAI1_PRUPE; Uncharacterized protein
STRINGXP_008239828.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.19e-67WRKY DNA-binding protein 72