PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G141300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 272aa    MW: 30004.9 Da    PI: 6.6367
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G141300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.1e-2059108255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa a++aa+++++g
  Prupe.5G141300.1.p  59 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEAAALAYDAAALRFKG 108
                         7********.**********9...3.35***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.6E-3358117IPR001471AP2/ERF domain
PROSITE profilePS5103225.05359116IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-2259117IPR016177DNA-binding domain
SMARTSM003802.4E-3759122IPR001471AP2/ERF domain
CDDcd000183.42E-2159117No hitNo description
PfamPF008473.8E-1459108IPR001471AP2/ERF domain
PRINTSPR003671.8E-116071IPR001471AP2/ERF domain
PRINTSPR003671.8E-118298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MSAMVSALAQ VIGITDQTPV VQVPAEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY  60
RGVRQRPWGK WAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ  120
GGDELGYLTT TGPQDLAAGG SRRTELAHHN QPLSDHQYQL QANPNNVNFT QPDQYAQYFR  180
GGNYENLSYD VLPSTFYERE RSFFSQTLSA TTTTSSSSSS VAFVPSQQED QDQHVQQQQP  240
LSFSMAQQPF GSSSSSSSDP YKNKKDFGQH P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2758123470ATERF1
3gcc_A1e-2758123470ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G141300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020418892.10.0ethylene-responsive transcription factor ERF113
TrEMBLA0A251P8C10.0A0A251P8C1_PRUPE; Uncharacterized protein
STRINGXP_008239643.11e-150(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-28ERF family protein