PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G117000.2.p
Common NamePRUPE_ppa008573mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 327aa    MW: 36513.6 Da    PI: 6.2428
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G117000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.3e-28130190259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK++ g+++prsYYrCt++   +C ++k+v+rs+edp+++eitY+g+H+++
  Prupe.5G117000.2.p 130 EDGHSWRKYGQKDILGAKHPRSYYRCTYRntqSCYATKQVQRSDEDPTIFEITYKGKHTCS 190
                         8***************************98889**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-28123190IPR003657WRKY domain
SuperFamilySSF1182903.53E-25128191IPR003657WRKY domain
SMARTSM007746.3E-39129191IPR003657WRKY domain
PROSITE profilePS5081121.597130187IPR003657WRKY domain
PfamPF031061.3E-26130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDSSKSWEHK SLLTEIIEGM ELAKQLRLSL SAASSSDTRQ FLVQRILSSY EKALLILNFS  60
GPAQSTAGAI ASVPESLVSA YAGPCFDDYN KSPKDHQDLT DVSKKRKIMA KWTDHVMRVS  120
SENGIEGPHE DGHSWRKYGQ KDILGAKHPR SYYRCTYRNT QSCYATKQVQ RSDEDPTIFE  180
ITYKGKHTCS HGSNSVLPPP SPEQQEQKRN KQNNTSHQQQ SQGIQMSFPT NLRVDTKFLE  240
DRENMASPFS FTSTSFGSAG ESNYYLMPPS QMRNIAGNEQ LSECGLTEII SANNSSTNSP  300
IPEMDFPLEP VEIEPNFPFD TTGIFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-20130189968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G117000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020419492.10.0probable WRKY transcription factor 53
TrEMBLM5WUU30.0M5WUU3_PRUPE; Uncharacterized protein
STRINGEMJ105500.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-56WRKY family protein