PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G090600.1.p
Common NamePRUPE_ppa022712mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 179aa    MW: 19407.7 Da    PI: 5.7398
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G090600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.6e-161058154
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                        s+y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+
  Prupe.5G090600.1.p 10 SRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAALALK 58
                        78****9.55.7*********843...5**********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.06E-141069No hitNo description
SuperFamilySSF541711.77E-171069IPR016177DNA-binding domain
PfamPF008471.1E-91058IPR001471AP2/ERF domain
SMARTSM003805.5E-241173IPR001471AP2/ERF domain
PROSITE profilePS5103219.1371167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-241168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MASSSCGKHS RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAAAAY DVAALALKRG  60
DAVLNFPSSI ASYPVPASTS PEDIRSAASA AAALQWNEEA NNSLKHRERQ KKQEDDMRTM  120
MNSSSLASSV GIDEEELFGM PNLLVEMAEG MLLSPPRPPD YPDSSGNSDG GESGLWSF*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G090600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210670.21e-129ethylene-responsive transcription factor ERF027, partial
SwissprotQ9FJ903e-43ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM5WDQ51e-128M5WDQ5_PRUPE; Uncharacterized protein
STRINGEMJ118691e-129(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-36ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]