PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G090300.1.p
Common NamePRUPE_ppa016829mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 181aa    MW: 19510.8 Da    PI: 5.3134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G090300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.3e-161058154
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                        s+y+G+r  ++ g+Wv+eIr+p++   ++r++lg+f tae+Aa+a++aa+++l+
  Prupe.5G090300.1.p 10 SRYHGIR--SRGGKWVSEIREPRK---TRRIWLGTFPTAEMAAAAYDAAALALK 58
                        7899**5..679*********843...5***********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.53E-131069No hitNo description
PfamPF008479.3E-101058IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-171069IPR016177DNA-binding domain
PROSITE profilePS5103219.5061167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-261168IPR001471AP2/ERF domain
SMARTSM003801.3E-241173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MASSPSGKQS RYHGIRSRGG KWVSEIREPR KTRRIWLGTF PTAEMAAAAY DAAALALKRA  60
DAVLNFPSSM DSYPVPASMS PQDIRSAAAA AAAATALQRN EDADNSLKVT ERQKKYEYDM  120
TMMSSTSLAS SVGMDEEELF GMPNLLANMA EGMLLSPPRP SDYPDSSGNS DGAESRLWSY  180
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-128711176Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G090300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210022.11e-128ethylene-responsive transcription factor ERF027
SwissprotQ9FJ904e-40ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM5WD451e-127M5WD45_PRUPE; Uncharacterized protein
STRINGEMJ112211e-127(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-26ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]